DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and TSPAN6

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_003261.1 Gene:TSPAN6 / 7105 HGNCID:11858 Length:245 Species:Homo sapiens


Alignment Length:226 Identity:58/226 - (25%)
Similarity:108/226 - (47%) Gaps:19/226 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQ--TIPICIIVIGSVTFVVAFFG 70
            ||.:|.:...:|...|::|:.||.....::.|:.:.   :|.:  .:|..:|..|:|..::..||
Human    17 FKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSL---LNEKATNVPFVLIATGTVIILLGTFG 78

  Fly    71 CCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENNAAQGY---P 132
            |..|.|.:|....:||:.:.::|.::|..:|..|....:..:|.....:||..:.|:...|   .
Human    79 CFATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKNSFKNNYEKALKQYNSTGDYRSHA 143

  Fly   133 MDALQLAFSCCGNTGYQQY--------ETVPSSCCGYKDRTKVCEAEIYSQRPGCRQEFVDFWAS 189
            :|.:|....|||.|.|:.:        :..|.|||..:|.|...:|:..:.. ||..:.:....|
Human   144 VDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKLEDCTPQRDADKVNNE-GCFIKVMTIIES 207

  Fly   190 NTDLIRWSSLIIALFEL-GIFIMSCCLASAM 219
            ...::...|..:|.|:| ||| ::.||:.|:
Human   208 EMGVVAGISFGVACFQLIGIF-LAYCLSRAI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 56/221 (25%)
TSPAN6NP_003261.1 Tetraspanin 17..235 CDD:459767 57/222 (26%)
TM4SF2_6_like_LEL 112..209 CDD:239414 23/97 (24%)

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