DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eb and TSPAN8

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_004607.1 Gene:TSPAN8 / 7103 HGNCID:11855 Length:237 Species:Homo sapiens


Alignment Length:243 Identity:58/243 - (23%)
Similarity:108/243 - (44%) Gaps:47/243 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSAMFKYLLYLLNLVFVAGGILLIVVG---SIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFV 65
            :||..||.::..|.:|...|||::.:.   .:...:...|.:.|.|.::......:|.:|::..:
Human     4 VSACIKYSMFTFNFLFWLCGILILALAIWVRVSNDSQAIFGSEDVGSSSYVAVDILIAVGAIIMI 68

  Fly    66 VAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIW--IFAA------------NDKFLSSMGK 116
            :.|.||||.|:|:.|...::.|.:|::..||:|..|.  :|.:            |.|.||:.|:
Human    69 LGFLGCCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIVNETLYENTKLLSATGE 133

  Fly   117 AVDKAWDENNAAQGYPMDALQLAFSCCG--------NTGYQQYETVPSSCCGYKDRTKVCEA--- 170
            : :|.:.|       .:...|..|.|||        ...:|.|..:    |...|:.:.|::   
Human   134 S-EKQFQE-------AIIVFQEEFKCCGLVNGAADWGNNFQHYPEL----CACLDKQRPCQSYNG 186

  Fly   171 -EIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFE-LGI---FIMSC 213
             ::|.:.  |.....||.|.|..::...|..:|:.| ||:   .::.|
Human   187 KQVYKET--CISFIKDFLAKNLIIVIGISFGLAVIEILGLVFSMVLYC 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 56/239 (23%)
TSPAN8NP_004607.1 Tetraspanin 8..232 CDD:459767 55/237 (23%)
hydrophobic region 10..33 6/22 (27%)
hydrophobic region 58..78 7/19 (37%)
hydrophobic region 83..109 7/25 (28%)
TM4SF3_like_LEL 106..206 CDD:239407 23/113 (20%)
hydrophobic region 206..232 5/25 (20%)

Return to query results.
Submit another query.