DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eb and Tspan2

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_081809.2 Gene:Tspan2 / 70747 MGIID:1917997 Length:221 Species:Mus musculus


Alignment Length:170 Identity:44/170 - (25%)
Similarity:80/170 - (47%) Gaps:11/170 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIML--STMGNFTAFDGGVNTQTIPICIIV-IGSV 62
            :.|:    ||||...||:|...|..:|..|....  .||.:.::.|.......:.:.::| .|::
Mouse     8 LRCI----KYLLLGFNLLFWLAGSAVIAFGLWFRFGGTMKDLSSEDKSPEYFYVGLYVLVGAGAL 68

  Fly    63 TFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDE--N 125
            ...|.||||||.:||:.|....:..|:|::|..::...::.|...|..:..:....::|:.:  .
Mouse    69 MMTVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKDVAIRHVQSMYEEAYSDYLK 133

  Fly   126 NAAQGY-PMDALQLAFSCCGNTGYQQYE-TVPSSCCGYKD 163
            :.|:|. .:.....||.|||....:|.: |.|....|:|:
Mouse   134 DRARGNGTLITFHSAFQCCGKESSEQVQPTCPKELPGHKN 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 43/163 (26%)
Tspan2NP_081809.2 Tetraspanin 11..212 CDD:459767 43/167 (26%)

Return to query results.
Submit another query.