DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tspan11

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:141 Identity:31/141 - (21%)
Similarity:54/141 - (38%) Gaps:32/141 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 TVTPSPMGCTPPILQAPFRRSADSSPSHSHSHSHSQIS----RNSSRKSNNSVNCRIEDVRLIPR 247
            |::||         .||  ||:.:....|::.|...:|    .:||.:|.::|..   ...|:| 
Mouse   174 TISPS---------YAP--RSSTAGMWLSNTTSEPSVSVVYHESSSAESKDNVTV---SAVLVP- 223

  Fly   248 KQSFLDPLLLKVPLKDVVCYLSLLEAGRPEDKLEF-----MFRLYDTDGNGVLDTTETDAIVN-- 305
                  .|||.:.|..:.......:..:....||.     :..:|...|:.|.......|:.|  
Mouse   224 ------VLLLLLALIAIAAAFMWKQKKKTRASLEVRQNSEISVIYSNSGSSVGLYNREMAVENVY 282

  Fly   306 QMMSVAEYLGW 316
            |:.:.:||..|
Mouse   283 QIQAESEYEQW 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 7/28 (25%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 20/90 (22%)
CD151_like_LEL 112..220 CDD:239408 14/59 (24%)

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