DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tspan31

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_080258.1 Gene:Tspan31 / 67125 MGIID:1914375 Length:210 Species:Mus musculus


Alignment Length:227 Identity:51/227 - (22%)
Similarity:86/227 - (37%) Gaps:58/227 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LYLLNLVFVAGGILLI----------VVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVV 66
            |..||:|::..|.|||          ||.||.:.         |||         |.:|....::
Mouse    13 LCALNVVYMLVGFLLIGVAAWGKGLGVVSSIHII---------GGV---------IAVGVFLLLI 59

  Fly    67 AFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDE-NNAAQG 130
            |..|..|....:......|.|.:.::|..|..:|....|.|   .::....::.:|.. :|:.: 
Mouse    60 AVAGLVGAANHHQVLLFFYMIILGLVFIFQFGISCSCLAIN---RNTQADVINASWSVLSNSTR- 120

  Fly   131 YPMDALQLAFSCCG----NTGYQQYETVPSSCCGYKDRTKVCEAEIYSQRPGCRQEFVDFWASNT 191
               ..|:.:|.|||    .|...|.:|..|:.|  |.::..|:.        |.:.|:.......
Mouse   121 ---HELERSFDCCGLFNLTTLRLQDDTSCSAVC--KTKSSTCQM--------CGERFLKHSDKAL 172

  Fly   192 DLIRWSSLIIALFE-LGIFIMSCCLASAMRKR 222
            .::....|..:..| ||:::       |||.|
Mouse   173 KILGGVGLFFSFTEILGVWL-------AMRFR 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 47/219 (21%)
Tspan31NP_080258.1 Tetraspanin 9..196 CDD:459767 49/224 (22%)

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