DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tspan2

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_072111.1 Gene:Tspan2 / 64521 RGDID:620982 Length:221 Species:Rattus norvegicus


Alignment Length:178 Identity:43/178 - (24%)
Similarity:77/178 - (43%) Gaps:27/178 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQT----------IPIC 55
            :.|:    ||||...||:|...|..:|        ..|.:..|.|.:...:          :.:.
  Rat     8 LRCI----KYLLLGFNLLFWLAGSAVI--------AFGLWFRFGGTIKDLSSEEKSPEYFYVGLY 60

  Fly    56 IIV-IGSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVD 119
            ::| .|::...|.||||||.:||:.|....:..|:|::|..::...::.|...|..:..:....:
  Rat    61 VLVGAGALMMAVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKDVAIRHVQSMYE 125

  Fly   120 KAWDENNAAQGYPMDAL---QLAFSCCGNTGYQQYE-TVPSSCCGYKD 163
            :|:.:....:|.....|   ..||.|||....:|.: |.|....|:|:
  Rat   126 EAYSDYVRDRGRGNGTLITFHSAFQCCGKESSEQVQPTCPKELPGHKN 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 42/171 (25%)
Tspan2NP_072111.1 Tetraspanin 11..212 CDD:459767 42/175 (24%)

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