DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and PRPH2

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_000313.2 Gene:PRPH2 / 5961 HGNCID:9942 Length:346 Species:Homo sapiens


Alignment Length:268 Identity:52/268 - (19%)
Similarity:101/268 - (37%) Gaps:75/268 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVVAFFGCCGTIR 76
            |:|:|...|..||::..:|..:...:...:.......:..:|..:|.:|.::.|  |....|.|.
Human    20 LWLMNWFSVLAGIIIFSLGLFLKIELRKRSDVMNNSESHFVPNSLIGMGVLSCV--FNSLAGKIC 82

  Fly    77 ENACCTTIYA---------ICMLILFGLQLAL-SIWIFAANDKFLSSMGKAVDKAW----DENNA 127
            .:|.....||         :.:.:||.:.|.| ::..|.......:::|:.:....    |.:..
Human    83 YDALDPAKYARWKPWLKPYLAICVLFNIILFLVALCCFLLRGSLENTLGQGLKNGMKYYRDTDTP 147

  Fly   128 AQGY---PMDALQLAFSCCGNTGYQQY--------------------------------ETVPSS 157
            .:.:   .:|.||:.|.||||.|::.:                                :.||.|
Human   148 GRCFMKKTIDMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLVDGVPFS 212

  Fly   158 CC--------------------GYKDRTKVCEAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIA 202
            ||                    .|..:|:  |..::.:  |||...:.:::|..:.:...:|:|.
Human   213 CCNPSSPRPCIQYQITNNSAHYSYDHQTE--ELNLWVR--GCRAALLSYYSSLMNSMGVVTLLIW 273

  Fly   203 LFELGIFI 210
            |||:.|.|
Human   274 LFEVTITI 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 52/268 (19%)
PRPH2NP_000313.2 Tetraspanin 16..181 CDD:459767 33/162 (20%)
peripherin_like_LEL 120..262 CDD:239415 24/145 (17%)
Interaction with MREG. /evidence=ECO:0000250 341..346
Blue background indicates that the domain is not in the aligned region.

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