DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and prph2a

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_571641.1 Gene:prph2a / 58085 ZFINID:ZDB-GENE-000616-8 Length:345 Species:Danio rerio


Alignment Length:265 Identity:45/265 - (16%)
Similarity:91/265 - (34%) Gaps:67/265 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVVAFFGCCGTI 75
            :|:|:....|..|:|:..:|......:...:.......:..:|..:|.:|.:...:..||  |.:
Zfish    19 MLWLMYWFSVMAGVLVFSMGLFFKIELRKRSELMDNNESHFVPNILIGVGLLACCLNAFG--GKV 81

  Fly    76 RENACCTTIYA----------ICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAW----DENN 126
            ..::..::.||          ||.|:...|.:..:...||.......::.:.:....    |.:.
Zfish    82 CYDSLDSSKYAKWKSIMTPFLICCLVFNFLLIVTAAMCFAMRIPLEFTLAEGLKNGMKYYKDTDT 146

  Fly   127 AAQGY---PMDALQLAFSCCGNTGYQQY--------------------------------ETVPS 156
            ..:.|   .:|.:|:.|.||||..|:.:                                :.||.
Zfish   147 PGRCYMKRTLDLMQMEFRCCGNNNYKDWFEIQWVSNRYLDFSAKEVKDRISSNVDGKYLMDGVPF 211

  Fly   157 SCCGYKDRTKVCEAEI-----------YSQ-----RPGCRQEFVDFWASNTDLIRWSSLIIALFE 205
            |||.........:.:|           |::     :.|||...|.::....:.|....|::.|.:
Zfish   212 SCCNPSSPRPCIQQQITNNSAHYSYDHYTEDLNIWKRGCRDALVSYYGGMMNTIGVLVLLVTLLQ 276

  Fly   206 LGIFI 210
            ..:.|
Zfish   277 SAVMI 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 45/265 (17%)
prph2aNP_571641.1 Tetraspanin 16..>167 CDD:459767 26/149 (17%)
peripherin_like_LEL 120..262 CDD:239415 23/141 (16%)

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