DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tspan33b

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_005159085.1 Gene:tspan33b / 567512 ZFINID:ZDB-GENE-060503-607 Length:266 Species:Danio rerio


Alignment Length:257 Identity:63/257 - (24%)
Similarity:106/257 - (41%) Gaps:49/257 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVVAF 68
            |:...:|.|:..:.:|....:|::.:|....:.....|..|..:....  :.:||:|.|.|.:.|
Zfish    16 LNPWIRYFLFFFSFLFWVFSLLIVAIGVYAKAQKATDTVRDSFLIDPA--VILIVVGVVMFFITF 78

  Fly    69 FGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKA-------WDENN 126
            .||.|.:|||.....|::..:.::|..|:|::|..|..:::...::|:.|.||       .|..|
Zfish    79 CGCIGALRENIRLLKIFSFSLTLVFLTQMAIAILGFFYSEQTRDALGEFVKKAIVHYRDDLDLQN 143

  Fly   127 AAQGYPMDALQLAFSCCGNTGYQQYE-----------------TVPSSCCGYKDRTKVCEA---- 170
            .     ||.:|..|.|||.|.|..:.                 :||.|||....|..|..:    
Zfish   144 L-----MDYIQKEFKCCGWTNYTDWSWNPYFNCSSSNPSNERCSVPFSCCTPLPRETVINSMCGF 203

  Fly   171 ------------EIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLASAMR 220
                        .|||  .||....|.:..|:..|....:|.:||.::...::|..|.|.:|
Zfish   204 GIQTQNHLNATKSIYS--VGCADRAVIWIESHLLLFGALTLGLALPQIAGIVLSQILISEIR 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 59/247 (24%)
tspan33bXP_005159085.1 Tetraspanin 36..>156 CDD:459767 33/126 (26%)
penumbra_like_LEL 114..234 CDD:239411 30/126 (24%)

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