DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tspan5

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_006501799.1 Gene:Tspan5 / 56224 MGIID:1928096 Length:311 Species:Mus musculus


Alignment Length:310 Identity:58/310 - (18%)
Similarity:97/310 - (31%) Gaps:114/310 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   722 RATDVPLPPTANGTTQRAAVSDNNGFAIGPDAAGTA-----RVAAMTATPPPTPTTPFAGGA--- 778
            |....|||  .:|..|...|:.||.......|.|.|     |.|....|||..|..|.....   
Mouse    56 RPPPAPLP--MHGDPQLPGVAANNNTLPALGAGGWAGWRGPREAVGRETPPLPPPPPLPPSVEDD 118

  Fly   779 -NGPTVMEGFIAEHANRGAGGPPLTNGGATTLVSSIAGVDE-----DDDDVAANTGTNGSAPPVD 837
             :||.:              |||      .:|:|| |..||     .:|..:..:..:|...|: 
Mouse   119 WDGPAI--------------GPP------ASLLSS-ASSDEFCKEKTEDCYSLGSLDSGMRTPL- 161

  Fly   838 NGPCANDDDAAQRAE-------DDTVNSSYQQ----------------QQQHHHSNGNATDKPRP 879
               |.......::.|       |.:|..::|.                ....:|....:|..|. 
Mouse   162 ---CRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTKNPL- 222

  Fly   880 EKKIIDLPKLIKPQVGSEFTVPYNIVNNYFSVGVDAAICVKFHLEREKNPHKFNSRMKNKLWYFE 944
            :.:.|.|..:.|.|:.:.      |:.:.|.:                      :.:...:|   
Mouse   223 QWQAISLTVIEKVQIAAA------ILGSLFLI----------------------ASISWLIW--- 256

  Fly   945 YATSETFAAS------------CKNLHEYLEIVCDGVSLELANGPQLQGI 982
                .||:.|            |..::.::::||  :.|.:..||.:..|
Mouse   257 ----STFSPSAKWQRQDLLFQICYGMYGFMDVVC--IGLIIHEGPSVYRI 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767
Tspan5XP_006501799.1 Tetraspanin 72..301 CDD:459767 52/292 (18%)
TM4SF9_like_LEL 156..276 CDD:239412 20/159 (13%)
Blue background indicates that the domain is not in the aligned region.

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