DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tspan5b

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001008591.1 Gene:tspan5b / 494048 ZFINID:ZDB-GENE-041212-12 Length:271 Species:Danio rerio


Alignment Length:260 Identity:62/260 - (23%)
Similarity:99/260 - (38%) Gaps:73/260 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYLLYLLNLVFVAGGILLIVVG------SIMLSTMGNFTAFDGGVNTQTIPICI-IVIGSVTFVV 66
            ||.::..|::|...|:..:.|.      ..:||.:.:.|.. ||.:    |:.: :|:|.|.||:
Zfish    16 KYFIFGFNIIFWLLGVAFLSVALWAWSEKGVLSNISSITDL-GGFD----PVWLFLVVGGVMFVL 75

  Fly    67 AFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAAND------KFLSSMGKAVDKAWDEN 125
            .|.||.|.:|||:.....:::.:.|:|.|:|...:..|...|      ||..            |
Zfish    76 GFAGCIGALRENSFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLKFFI------------N 128

  Fly   126 NAAQGYP--------MDALQLAFSCCGNTGYQQYET-----------------VPSSC------- 158
            |..:.|.        :|..|..:.|||..|.:.:..                 ||.||       
Zfish   129 NNIRAYRDDIDLQNLIDFTQDYWECCGAFGPEDWNLNIYFNCTDTNLSREKCGVPFSCCTKDPAE 193

  Fly   159 ------CGYKDRTK-VCEAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLA 216
                  |||..|.| ..|.:.:....||..:|..:...|..::....:.|||.:    |...|||
Zfish   194 DVINTQCGYDIRGKGDIEHKTFIHTKGCVPQFEKWLQENLTVVAGIFIGIALLQ----IFGICLA 254

  Fly   217  216
            Zfish   255  254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 60/258 (23%)
tspan5bNP_001008591.1 Tetraspanin 15..258 CDD:459767 62/260 (24%)
TM4SF9_like_LEL 113..233 CDD:239412 26/131 (20%)

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