DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tspan5a

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_068078345.1 Gene:tspan5a / 450026 ZFINID:ZDB-GENE-041010-145 Length:301 Species:Danio rerio


Alignment Length:259 Identity:62/259 - (23%)
Similarity:100/259 - (38%) Gaps:61/259 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSAMFKYLLYLLNLVFVAGGILLIVVG------SIMLSTMGNFTAFDGGVNTQTIPICI-IVIGS 61
            :|...||.::..|::|...|:..:.:|      ..:||.:.:.|.. ||.:    |:.: :|:|.
Zfish    25 VSCCIKYFIFGFNIIFWLLGVAFLGIGLWAWSEKGVLSNISSITDL-GGFD----PVWLFLVVGG 84

  Fly    62 VTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENN 126
            |.|::.|.||.|.:|||......:::.:.|:|.|:|...|..|...|.....:...:      ||
Zfish    85 VMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGILAFVFKDWIKDQLNFFI------NN 143

  Fly   127 AAQGYP--------MDALQLAFSCCGNTGYQQYET-----------------VPSSC-------- 158
            ..:.|.        :|..|..:.|||..|...:..                 ||.||        
Zfish   144 NIRAYRDDIDLQNLIDFTQEYWECCGAFGADDWNLNIYFNCTDSNPSREKCGVPFSCCTKDPAED 208

  Fly   159 -----CGYKDRTKV-CEAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLA 216
                 |||..|.|. .|.:.|....||..:|..:...|..::....:.|||.:    |...|||
Zfish   209 VINTQCGYDVRAKPDAEQKTYIHVKGCVPQFEKWLQDNLTVVAGIFIGIALLQ----IFGICLA 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 59/253 (23%)
tspan5aXP_068078345.1 Tetraspanin 29..272 CDD:459767 61/255 (24%)
TM4SF9_like_LEL 127..247 CDD:239412 25/125 (20%)

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