DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and cd81b

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001003735.1 Gene:cd81b / 445280 ZFINID:ZDB-GENE-040808-52 Length:238 Species:Danio rerio


Alignment Length:243 Identity:62/243 - (25%)
Similarity:102/243 - (41%) Gaps:49/243 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SAMFKYLLYLLNLVF-VAGGILLIVV----------GSIMLSTMGNFTAFDGGVNTQTIPICI-- 56
            |...||:|:.||.:| :|||::|.|.          ..:||.       |:|.....|..|.:  
Zfish     7 SQCIKYMLFFLNFIFWLAGGVILGVALWLRHDSQTSNLLMLQ-------FEGNQAPGTFYISVYV 64

  Fly    57 -IVIGSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDK 120
             |.||::...|.|.||.|.|:|:.|....:..|::|||..::|..||.|...|...:.:....|.
Zfish    65 LIAIGAIMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFINRDTISTELINFYDA 129

  Fly   121 AWDENNAAQGYPMDALQLAFSCCGNTGYQQYETVPSS--CCGYKD--------RTKVCEAEIYSQ 175
            |:          :.|:....:....|..:..|....:  |||..|        :|.:|..:.:..
Zfish   130 AY----------IKAVDPVDTTSRQTASKVLEVFHDNLDCCGKGDDNDLFKVVQTSLCPKKTFPL 184

  Fly   176 RP----GCRQEFVDFWASNTDLIRWSSLIIA---LFELGIFIMSCCLA 216
            .|    .|..:..:.::....:|..::|:||   :||: ||.|..|.|
Zfish   185 DPLISQSCHVKLRNLFSEKLHVIGLAALVIAVIMVFEM-IFTMVLCCA 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 60/238 (25%)
cd81bNP_001003735.1 Tetraspanin 10..230 CDD:459767 59/237 (25%)

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