DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tspan33a

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001002617.2 Gene:tspan33a / 436890 ZFINID:ZDB-GENE-040718-361 Length:281 Species:Danio rerio


Alignment Length:255 Identity:64/255 - (25%)
Similarity:106/255 - (41%) Gaps:65/255 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPIC--------IIVIG 60
            :|.:.||||:..|::|....::||.:|           .:...|..:|...|        ::|:|
Zfish    17 VSPVVKYLLFFFNMIFWIISLVLISIG-----------VYSRIVKHETALACLTVDPALILMVVG 70

  Fly    61 SVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDEN 125
            .:.|.:.|.||.|::|||.|....:.|.:.|:|.|||...:..|..:||   :.||..|..   :
Zfish    71 ILMFFITFCGCVGSLRENICLLQTFCIFLTIMFLLQLLAGVLGFVFSDK---ARGKVTDMF---D 129

  Fly   126 NAAQGYP--------MDALQLAFSCCGNTGYQQYE-----------------TVPSSCCGY-KDR 164
            ||.:.|.        :|..|..|:|||...:..:.                 :||.|||.: |:.
Zfish   130 NAIKHYRDDLDLQNLIDYGQKQFNCCGGISFMDWSKNMYFNCSDDNPSRERCSVPFSCCLHAKEE 194

  Fly   165 T---KVC----------EAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFEL-GIFI 210
            |   .:|          .|..:....||....|::..||..|:...:|.:.:.:| ||.:
Zfish   195 TIINTMCGHGMQALNYLAASAFINTNGCIDILVNWIHSNLFLLGGIALGLTIPQLVGILL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 63/251 (25%)
tspan33aNP_001002617.2 Tetraspanin 21..260 CDD:459767 63/251 (25%)
penumbra_like_LEL 114..234 CDD:239411 28/125 (22%)

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