DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tspan6

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_999939.1 Gene:tspan6 / 406802 ZFINID:ZDB-GENE-030131-5435 Length:251 Species:Danio rerio


Alignment Length:240 Identity:65/240 - (27%)
Similarity:101/240 - (42%) Gaps:37/240 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFT-AFDGGVNTQ---TIPICIIVIGS 61
            :.||    |..|...:|:|...|::|:.||     ..|... .||..||::   ..|..:|..|:
Zfish    14 ITCL----KTFLISYSLIFWFTGVILLAVG-----VWGKVNLEFDLLVNSEHGTNAPYVLIGTGA 69

  Fly    62 VTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENN 126
            |..:...|||..|.|.:.....:||:.::::|..:|...|..|....:..:.:..|..||.....
Zfish    70 VIIIFGLFGCFATCRGSPWMLKLYAMFLVLVFLAELVAGISGFIFRHEIKAVLKGAYQKAESNYM 134

  Fly   127 AAQGYPMDALQLAFSCCG--------NTGYQQYETVPSSCCG-----------YKDRTKVCEAEI 172
            ......:|.:|....|||        ||.|.:.|.:|.|||.           .|| .|..::.:
Zfish   135 GKDDEDLDRIQRTLQCCGEENYTSWANTTYFEKEGIPKSCCNVTASVNCTSAELKD-LKKADSVV 198

  Fly   173 YSQRPGCRQEFVDFWASNTDLIRWSSLIIALFE-LGIFIMSCCLA 216
            |.|  ||.........:|..:|...|..||.|: :||| ::|||:
Zfish   199 YHQ--GCFSLMSTTMEANLGIIAGISFGIAFFQVIGIF-LACCLS 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 62/231 (27%)
tspan6NP_999939.1 Tetraspanin 17..241 CDD:459767 64/237 (27%)
TM4SF2_6_like_LEL 112..215 CDD:239414 24/105 (23%)

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