DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tspan7

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_989350.1 Gene:tspan7 / 394976 XenbaseID:XB-GENE-941774 Length:249 Species:Xenopus tropicalis


Alignment Length:238 Identity:61/238 - (25%)
Similarity:102/238 - (42%) Gaps:33/238 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFV 65
            :.||    |.||.:.:.||...|::|:.||.....|:|.:.:.. ..|:...|..:|..|:...|
 Frog    12 ITCL----KTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLI-AENSTNAPYVLIGTGTTIIV 71

  Fly    66 VAFFGCCGTIRENACCTTIYAICMLILFGLQL--ALSIWIF--AANDKFLSSMGKAVDKAWDENN 126
            ...|||..|.|.:.....:||:.:.::|..:|  .:|.::|  ...|.||.:..:|:...  ..|
 Frog    72 FGLFGCFATCRGSPWMLKLYAMFLSLVFLAELIAGISGFVFRHEIKDTFLRTYTEAIQNY--NGN 134

  Fly   127 AAQGYPMDALQLAFSCCGNTGYQQYET--------VPSSCCGYKDRTKVCEAE----------IY 173
            ..:...:|.:|.:..|||...|..:.|        .|||||.   .|..|..:          ..
 Frog   135 DERSQAVDDVQRSLRCCGVQYYTNWTTSLYWHDHGFPSSCCA---NTSDCNPQDLRNMTINFTKV 196

  Fly   174 SQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLA 216
            :|| ||.:....|..:|..:|...:..||..:|...:::|||:
 Frog   197 NQR-GCYELVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLS 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 58/229 (25%)
tspan7NP_989350.1 Tetraspanin 15..239 CDD:459767 60/235 (26%)
TM4SF2_6_like_LEL 110..213 CDD:239414 25/108 (23%)

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