DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and cd81

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:229 Identity:56/229 - (24%)
Similarity:100/229 - (43%) Gaps:33/229 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYLLYLLNLVF-VAGGILLIVV--------GSIMLSTMGNFTAFDGGVNTQTIPI---CIIVIGS 61
            ||||::.|.:| :|||::|.|.        .|.:|     |..|:......|..|   .||.:|:
 Frog    11 KYLLFVFNFIFWLAGGVILGVALWLRHDPQTSNLL-----FQQFEDKHAPGTFYIGVYIIIAVGA 70

  Fly    62 VTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWD--- 123
            |...|.|.||.|.|:|:.|....:..|::|||..::|..||.|...|:....|.....:.:.   
 Frog    71 VMMFVGFLGCYGAIQESQCLLGTFFACLVILFACEVAAGIWGFVNRDQVSKEMRLFYSEVYQHAT 135

  Fly   124 ---ENNAAQGYP-MDALQLAFSCCGNTGYQQYETVP-SSCCGYKDRTKVCEAEIYSQRPGCRQEF 183
               :....:..| :.|......|||:...::|.|:. :..|  ..|:.:.|......   |.|:.
 Frog   136 TGTKEQQQKALPVLKAFHETLQCCGDASLKKYVTMSITDMC--PKRSNILEQITIED---CHQKI 195

  Fly   184 VDFWASNTDLIRWSSLIIA---LFELGIFIMSCC 214
            ...:::...|:..:::::|   :.|:...::.||
 Frog   196 DVLFSTKLYLVGIAAVVVAVIMIIEMIFSMVLCC 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 56/229 (24%)
cd81NP_989271.1 Tetraspanin 10..229 CDD:459767 54/227 (24%)

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