Protein Alignment Tsp42Eb and rom1b

DIOPT Version :10

• Sequence 1: NP_724525.1
• Gene: Tsp42Eb / 59177
• FlyBaseID: FBgn0042086
• Length: 222
• Species: Drosophila melanogaster
• Sequence 2: NP_957308.2
• Gene: rom1b / 393989
• ZFINID: ZDB-GENE-040426-1073
• Length: 352
• Species: Danio rerio
• Alignment Length: 285
• Identity: 53/285 - (18%)
• Similarity: 100/285 - (35%)
• Gaps: 91/285 - (31%)

  Fly    12 LYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVVAFFGCCGTIR 76
            |:||:.|.:..|.:....|..:.:.:...:.....::...:|..::.:|..:  |....|.|.:.
Zfish    20 LWLLSWVAMFSGAVTFATGVFLKTELHRRSEVMHSMDIHIVPNLLMAVGLAS--VGINICAGKVC 82

  Fly    77 ENA-----------------CC----TTIYAICMLILFGLQLAL--SIWIFAAND----KFLSSM 114
            :::                 |.    |::..:.|::.:.||.:|  |:.|...|.    |...:.
Zfish    83 QDSLDPSRFPRWKTLLLPFFCLSVFFTSLLLVAMILSYALQPSLEESLKIGLKNGIRFYKDTDTP 147

  Fly   115 GKAVDKAWDENNAAQGYPMDALQLAFSCCGNTGYQQY---------------------------- 151
            |:...|.          .:|.||:.|.|||||.|:.:
Zfish   148 GRCFQKE----------TIDRLQIEFQCCGNTNYRDWFEVQWISNRYLDFTSKEVKDRVRSNVDG 202

  Fly   152 ----ETVPSSCCG------------------YKDRTKVCEAEIYSQRPGCRQEFVDFWASNTDLI 194
                :.||.|||.                  |....:..|..:|::  ||||..|.::....:.|
Zfish   203 RYLLDGVPFSCCNPASPRPCIQYSLLDNNAHYNYEYQSEELNLYNR--GCRQALVSYYMGLMNTI 265

  Fly   195 RWSSLIIALFELGIFIMSCCLASAM 219
            ....|::.|.::.|.:....|.:||
Zfish   266 GPCVLLVFLLQMAILVGLRYLQTAM 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eb	NP_724525.1	Tetraspanin	8..216	CDD:459767	50/280 (18%)
rom1b	NP_957308.2	Tetraspanin	16..>167	CDD:459767	28/158 (18%)
		peripherin_like_LEL	120..262	CDD:239415	32/153 (21%)