DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tspan2a

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001018160.1 Gene:tspan2a / 378854 ZFINID:ZDB-GENE-050522-511 Length:211 Species:Danio rerio


Alignment Length:223 Identity:58/223 - (26%)
Similarity:90/223 - (40%) Gaps:34/223 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIML---STMGNFTAFDGGVNTQTIPICIIVIGSV 62
            |.|:    ||||::.|.:|...|.|::.||..:.   .|....:..|...|.......:|..|.:
Zfish     8 MKCV----KYLLFVFNFIFWLSGSLVLAVGLWLRFDPDTTSLLSENDAPENFFIAVYILIGAGGI 68

  Fly    63 TFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENNA 127
            ..:|.||||.|.:||:.|....:..|:|::||.::|..::.|...|:.:..:....:.|....|.
Zfish    69 MMIVGFFGCFGAVRESQCLLGSFFACLLLIFGAEVAAGVFGFLNKDQIIKEVQNYYESATKMENG 133

  Fly   128 AQGYPMDALQLAFSCCGNTGYQQYETVPSSCC--GYKDRTKVCEAEIYSQRPGCRQEFVDFWASN 190
            .  ....|......|||.      |:.|...|  |.||               |.|...||:...
Zfish   134 T--VITSAFHSVLDCCGT------ESSPIETCTEGNKD---------------CVQAIEDFFNEK 175

  Fly   191 TDLIRWSSLIIA-LFELG-IFIMSCCLA 216
            ..:|.:..:.|| :..:| ||.|..|.|
Zfish   176 LFIIGYVGIGIAGVMVIGMIFSMVLCCA 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 55/214 (26%)
tspan2aNP_001018160.1 Tetraspanin 11..202 CDD:459767 54/217 (25%)

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