DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tsp42Ef

DIOPT Version :9

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster


Alignment Length:214 Identity:59/214 - (27%)
Similarity:99/214 - (46%) Gaps:22/214 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVVAFFGCCGTI 75
            |..||.||.::.||.:.|  |..|:.:|..||:.           .:.:|:...:|..:|.....
  Fly    17 LCTLLALVLISFGIYVAV--SYNLNEIGQLTAYG-----------YVGLGAAALLVVLWGYLSAW 68

  Fly    76 RENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENNAAQGYPMDALQLAF 140
            |||.|||..:.|.:.::...|.|:...:........|::..|::..|:|...:.| .|...|..|
  Fly    69 RENVCCTVTFIIFLCLVIIAQFAVVYLLITQEKTVASNLANALEATWEEELNSPG-AMSLYQNWF 132

  Fly   141 SCCGNTGYQQY----ETVPSSCCGYKDRTKVCEAEIYSQRPGCRQEFVDFWASNTDLIRWSSLII 201
            .|||....|.|    ...|.:|....|::|. |..|::   |||.||.::|...|.:....:|::
  Fly   133 QCCGRGSPQDYIVNERLPPETCFRNHDKSKP-ENLIHT---GCRVEFENYWQHLTKIFNILALVL 193

  Fly   202 ALFELGIFIMSCCLASAMR 220
            ..|||.:.::||.|.:::|
  Fly   194 IGFELLLSVISCRLCNSIR 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspannin 8..219 CDD:278750 58/211 (27%)
tetraspanin_LEL 104..191 CDD:239401 25/90 (28%)
Tsp42EfNP_523632.2 Tetraspannin 7..211 CDD:278750 58/211 (27%)
tetraspanin_LEL 103..181 CDD:239401 25/82 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443003
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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