DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tsp42Ed

DIOPT Version :9

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001286152.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster


Alignment Length:221 Identity:85/221 - (38%)
Similarity:123/221 - (55%) Gaps:3/221 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFV 65
            |:|.....||:|::.|::||..|||||..||||:||:.:|:.........::.|.|:|:|.|.|:
  Fly     1 MDCGGVFVKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVGETFTANSVAIIILVLGCVVFL 65

  Fly    66 VAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENNAAQG 130
            |||.||||.||||:|..|.|::.||:|...||||.|:::..:.:...|:.|.|...||:.. ...
  Fly    66 VAFMGCCGAIRENSCALTSYSVVMLVLLVSQLALIIYVWVDHVQIQQSLEKIVQTIWDQRK-TDA 129

  Fly   131 YPMDALQLAFSCCGNTGYQQYE-TVPSSCCGYKDRTKVCEAEIYSQRPGCRQEFVDFWASNTDLI 194
            ..||.||.:|.|||..|:..|. |.|:|||. ......|.......|..|.:....||.:|..:|
  Fly   130 LLMDTLQRSFKCCGLNGFADYGITYPASCCD-SPSNGTCALTQVMTRSSCLKAVDSFWDTNVSII 193

  Fly   195 RWSSLIIALFELGIFIMSCCLASAMR 220
            :::.|.:...||..||.:||||:..|
  Fly   194 KYAGLGVTAVELVAFIFACCLANQTR 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspannin 8..219 CDD:278750 82/211 (39%)
tetraspanin_LEL 104..191 CDD:239401 25/87 (29%)
Tsp42EdNP_001286152.1 Tetraspannin 8..217 CDD:278750 82/210 (39%)
tetraspanin_LEL 104..189 CDD:239401 25/86 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467672
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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