DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eb and Tsp33B

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster


Alignment Length:274 Identity:60/274 - (21%)
Similarity:96/274 - (35%) Gaps:98/274 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIP--ICIIVIGSVTFVVAFFGCCGT 74
            |:||.:.....|:|::||           ||:...|.|..:.  .|.:|.|.: |.:..||    
  Fly    12 LHLLLITEAVIGLLILVV-----------TAYYHTVLTGYLSDIECRLVYGYL-FGIYVFG---- 60

  Fly    75 IRENACCTTIYAICMLILF----------GLQLALSIWIFAANDKFLSSMG------KAVDKAWD 123
                 ....:..:|.:.::          .::|.||:|.|.:.....|..|      :.||..  
  Fly    61 -----AQVVVTFLCSIAMWRRIWRRRCTPNIRLLLSVWAFYSCVIIASGFGCVWNLYRGVDVL-- 118

  Fly   124 ENNA----AQGYPM-----------DALQLAFSCCGNTGYQQYET----------------VPSS 157
            ||.|    .:|..|           |.||....|||..||:.:..                .|.:
  Fly   119 ENAADTSLTRGIDMYYSCPEWKLLWDGLQWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFA 183

  Fly   158 CCGYKDRTKVCE--------AEIYSQRPGCRQEF----VDFWASNTDLIRWSS-------LIIAL 203
            ||     .:.|:        :|..|.....||.|    ||...:|..|..:.|       :::||
  Fly   184 CC-----KRSCDSCFNNFLPSEGQSIGGNSRQPFPALTVDSINANGCLPAFVSAVWNCFYILMAL 243

  Fly   204 FELGI--FIMSCCL 215
            :.|.:  .|:.||:
  Fly   244 WVLALKFLIVLCCM 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 60/274 (22%)
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 29/131 (22%)

Return to query results.
Submit another query.