DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tsp29Fa

DIOPT Version :9

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster


Alignment Length:252 Identity:67/252 - (26%)
Similarity:110/252 - (43%) Gaps:60/252 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVVAFFGCCG 73
            ||.|:..||:|:..||:||.||:.:.:....:..|..| ...:||..:|||||...:::||||.|
  Fly    12 KYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAG-KFFSIPTFLIVIGSFIIIISFFGCWG 75

  Fly    74 TIRENACCTTIYAICMLILFGLQLALSIWIFA----ANDKFLSSM-----------GKAVDKAWD 123
            .::||.|....:::.:.|:|.|:||..|..:.    |:|...:|:           ..|..|.||
  Fly    76 ALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKLWD 140

  Fly   124 ENNAAQGYPMDALQLAFSCCGNTGYQQYET------VPSSCC-----------------GYKDRT 165
            :           :|..|.|||.|.|..:.|      :|.|||                 ...||.
  Fly   141 D-----------IQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSVADRH 194

  Fly   166 KVCEAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLASAMRKR 222
            ||          ||...|..:.:::...:..:.::||:.:....|.:|.:|..::.|
  Fly   195 KV----------GCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIKIR 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspannin 8..219 CDD:278750 66/247 (27%)
tetraspanin_LEL 104..191 CDD:239401 26/124 (21%)
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 66/247 (27%)
tetraspanin_LEL 106..210 CDD:239401 26/124 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443002
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1145558at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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