DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and cd82b

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_997828.1 Gene:cd82b / 324137 ZFINID:ZDB-GENE-030131-2857 Length:256 Species:Danio rerio


Alignment Length:246 Identity:63/246 - (25%)
Similarity:104/246 - (42%) Gaps:30/246 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CLSAMFKYLLYLLNLVFVAGGILLIVVGS-IMLSTMGNFTAFDGGVNTQTIPICIIV-IGSVTFV 65
            |::|. ||.|:|.||:|...|.:::..|. :.|.:....|.......:..:...|:: |||::.:
Zfish     5 CIAAT-KYFLFLFNLLFFILGAVIMGFGLWVRLDSQSFLTVLQESSTSLKVGAYILIGIGSLSML 68

  Fly    66 VAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKA----WDENN 126
            :.|.||.|.|.|..|...:|..|:|::...|:..::.|:...|.........|:|.    ...||
Zfish    69 MGFLGCIGAIYEIRCLLGLYFTCLLLILIAQVTAAVLIYFQRDLLKGETYNIVNKILVNYTGSNN 133

  Fly   127 AAQGYPMDALQLAFSCCGNTGYQQY-ETV----------PSSCCGY------KDRTKVCEAEIYS 174
            .::. ..|.:|....|||.:|...: |.|          |.||...      |.....||. :..
Zfish   134 TSED-AWDYIQRTMKCCGWSGQSDWKENVMIKNNSKILYPCSCRNESISGSDKQEKGFCEG-LSP 196

  Fly   175 QRP----GCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLASAMRK 221
            |.|    ||.....|:...|..:|....:.||:.||...|:|.||..::::
Zfish   197 QWPVFTKGCISSLEDWILRNCGVILGVCVGIAVIELLGMILSMCLCKSVQQ 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 60/234 (26%)
cd82bNP_997828.1 Tetraspanin 24..243 CDD:459767 54/220 (25%)
CD37_CD82_like_LEL 106..218 CDD:239413 26/113 (23%)

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