DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and cd82a

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_997826.3 Gene:cd82a / 324098 ZFINID:ZDB-GENE-030131-2818 Length:256 Species:Danio rerio


Alignment Length:252 Identity:66/252 - (26%)
Similarity:105/252 - (41%) Gaps:54/252 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAF--DGGVNTQTIPICIIVIGSVTFV 65
            |::|. ||.|:|.|.:|...|..::..|..:|....:..|.  :..|..:.:...:|.:||.:.:
Zfish     5 CITAT-KYFLFLFNFIFFIFGATIMGFGLWILLDNQSLIAVLQESSVILKVVSYILIGVGSFSML 68

  Fly    66 VAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIF-------AANDKFLSSM-------GK 116
            :.|.||.|.|.|..|...:|..|:|::...|:|:||.|:       ...||.:|.:       .|
Zfish    69 LGFLGCLGAIYEIRCLLGLYFTCLLLILLAQVAVSILIYFQRDLLKTEADKIVSQVVANYPGQNK 133

  Fly   117 AVDKAWDENNAAQGYPMDALQLAFSCCGNTGYQQYE--------TV---PSSCCGYKDRTKV--- 167
            ..::||           |.||....|||..|...::        ||   |.||..|..:..:   
Zfish   134 TAEQAW-----------DYLQRTMQCCGWNGRMDWDENHIIKNNTVPLYPCSCHNYSIQAPIVPD 187

  Fly   168 ---CEAE-----IYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFEL--GIFIMSCC 214
               |:|.     ||  :.||.:....:..:|..:|....|.:|:.||  .||.|..|
Zfish   188 NGFCQASSSDWPIY--QTGCLEHVGSWLFTNYGIILGICLGVAVIELLGMIFSMGLC 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 64/247 (26%)
cd82aNP_997826.3 None

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