DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and cd9a

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_005159038.1 Gene:cd9a / 322455 ZFINID:ZDB-GENE-030131-1175 Length:228 Species:Danio rerio


Alignment Length:240 Identity:56/240 - (23%)
Similarity:99/240 - (41%) Gaps:55/240 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDG---------GVNTQTIPICIIVIGSVTF 64
            |||:::.|.:|...|..::.||..:.......:.|:|         ||      ..:|..|::..
Zfish    12 KYLMFVFNFIFWIAGTAVLAVGLWLRFDPKTKSLFEGENSPYVFYTGV------YILIAAGALMM 70

  Fly    65 VVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENNAAQ 129
            ||.||||||.|:|:.|...::...:|::|.:::|..||.|:...|....:.....:.:|   ..|
Zfish    71 VVGFFGCCGAIQESPCMLGLFFFFLLVIFAVEVAAGIWGFSNQTKVTEDITTFYRQTYD---TYQ 132

  Fly   130 GYPMDAL-------QLAFSCCGNTGYQQYETVPSSCCGYKDRTKVCEAEIYSQRPG--------C 179
            ....:||       |...:|||.:|..| |::..:|               .::.|        |
Zfish   133 QSKQEALKKTLRLFQHGLNCCGPSGNMQ-ESLDETC---------------PKKEGLDNLIIKSC 181

  Fly   180 RQEFVDFWASNTDLIRWSSL---IIALFELGIFIMSCCLASAMRK 221
            .....:.:.|...:|....:   :|.:|.:...:|.||   |:||
Zfish   182 PDAIDEVFNSKLHIIGGVGIATGVIMIFGMIFSMMLCC---AIRK 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 53/233 (23%)
cd9aXP_005159038.1 Tetraspanin 11..219 CDD:459767 51/231 (22%)
CD9_LEL 110..193 CDD:239405 17/101 (17%)

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