DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and cd63

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_955837.1 Gene:cd63 / 321461 ZFINID:ZDB-GENE-030131-180 Length:237 Species:Danio rerio


Alignment Length:234 Identity:62/234 - (26%)
Similarity:107/234 - (45%) Gaps:35/234 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVVAFFGCCG 73
            ||||:..|.:|...|:.|||:|.::..::.|.....|...:   |:.:||:|.:.|.::||||||
Zfish    11 KYLLFFFNFIFWLCGLALIVLGILVHVSLHNTAILQGASGS---PMVLIVVGVIIFFISFFGCCG 72

  Fly    74 TIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENNAAQGY------- 131
            ..:||.|....:||.:.::...::...|    |...|...:.:.:|:::  |....||       
Zfish    73 AWKENQCMVVTFAIILSLIVITEIGAGI----AGYIFRGKVNELLDQSF--NTMIAGYNKTEEYR 131

  Fly   132 -PMDALQLAFSCCGNTGYQQYE-------TVPSSCCGYKDRTKVC-------EAEIYSQRPGCRQ 181
             .:|::|....|||......:.       :||.|||  |:.||.|       ...||.:  ||:.
Zfish   132 TTLDSIQKQLKCCGGNSSSDWVNFSADHISVPDSCC--KNVTKNCGIGAMTKPTVIYLE--GCQP 192

  Fly   182 EFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLASAMR 220
            ........|...|...:|:|...::...:::|.|:.|:|
Zfish   193 ILETRIKENILWIAVGALVIGFVQITGIVLACILSRAIR 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 59/228 (26%)
cd63NP_955837.1 Tetraspanin 10..228 CDD:459767 60/229 (26%)
CD63_LEL 103..202 CDD:239419 23/104 (22%)

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