DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tsp5D

DIOPT Version :9

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster


Alignment Length:223 Identity:55/223 - (24%)
Similarity:95/223 - (42%) Gaps:57/223 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CLSAMFKYL---LYLLNLVFVAGGILLIVVGSIMLSTMGNFTAF--DGGVNTQTIPICIIVIGSV 62
            |:...|.:|   |:|.:..|:..|:.|      .||..|..|..  ..|::..||   .:.||..
  Fly     8 CIRRTFCWLNIILWLCSCAFLGAGLWL------RLSYAGYATLLPQHAGLSADTI---FMGIGGT 63

  Fly    63 TFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGK--------AVD 119
            .|||:||||||...::.|...:|.:.:::||..:..:....|.    |...:|:        .::
  Fly    64 GFVVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFL----FRGGLGRTLANELRFGIE 124

  Fly   120 KAWDENNAAQGYPM--------DALQLAFSCCGNTGYQQY---------ETVPSSCCGYKDRTKV 167
            :.:  |::.:|..:        |::|.:|.|||.:.|:.:         ..||.|||    ||..
  Fly   125 RHY--NSSDRGSLVAPSVASIWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCC----RTLY 183

  Fly   168 CEAEIYSQ-------RPGC-RQEFVDFW 187
            .:.::.::       ||.| |.|....|
  Fly   184 DQRQVLTEGSGDGMMRPDCGRSENPSLW 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspannin 8..219 CDD:278750 54/218 (25%)
tetraspanin_LEL 104..191 CDD:239401 25/117 (21%)
Tsp5DNP_001259266.1 Tetraspannin 8..256 CDD:278750 55/223 (25%)
NET-5_like_LEL 105..228 CDD:239418 25/117 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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