Protein Alignment Tsp42Eb and Tspan18

DIOPT Version :10

• Sequence 1: NP_724525.1
• Gene: Tsp42Eb / 59177
• FlyBaseID: FBgn0042086
• Length: 222
• Species: Drosophila melanogaster
• Sequence 2: NP_001101220.1
• Gene: Tspan18 / 311210
• RGDID: 1560411
• Length: 248
• Species: Rattus norvegicus
• Alignment Length: 249
• Identity: 57/249 - (22%)
• Similarity: 109/249 - (43%)
• Gaps: 44/249 - (17%)

  Fly     2 NCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPI------CIIVIG 60
            :|||.| |||:::.|.....||..|:.||..:|.....|...     ..|.|:      .::.:|
  Rat     4 DCLSCM-KYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREI-----VATNPLLTTGAYVVLAMG 62

  Fly    61 SVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAAND----KFLSSMGKAVDKA 121
            .:.|::.|.||||.:|||.|....:.:.:||:|.::|:.:|..|...:    :|.:   |.:.|.
  Rat    63 GLLFLLGFLGCCGAVRENRCLLLFFFLFILIIFLVELSAAILAFIFREHLTREFFT---KELTKH 124

  Fly   122 WDENNAAQGY--PMDALQLAFSCCGNTGYQQY-------------ETVPSSCCGYKDRTK----- 166
            :..:|....:  ..:::.:.|.|||..|.:.:             |.||.:||..:.:|:
  Rat   125 YQGDNDTDVFSATWNSVMITFGCCGVNGPEDFKLASVFRLLTLDTEEVPKACCRREPQTRDGVVL 189

  Fly   167 ---VCE--AEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCL 215
               .|:  ...:..:.||....::.:.:...|....::.:...||.:.:.:.||
  Rat   190 SREECQLGRNPFINKQGCYTVILNTFETYVYLAGAFAIGVLAIELFLMVFAMCL 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eb	NP_724525.1	Tetraspanin	8..216	CDD:459767	53/243 (22%)
Tspan18	NP_001101220.1	Tetraspanin	10..245	CDD:459767	53/242 (22%)
		uroplakin_I_like_LEL	105..218	CDD:239409	19/115 (17%)