Protein Alignment Tsp42Eb and Tspan17

DIOPT Version :10

• Sequence 1: NP_724525.1
• Gene: Tsp42Eb / 59177
• FlyBaseID: FBgn0042086
• Length: 222
• Species: Drosophila melanogaster
• Sequence 2: XP_006253692.1
• Gene: Tspan17 / 306771
• RGDID: 1311167
• Length: 281
• Species: Rattus norvegicus
• Alignment Length: 251
• Identity: 65/251 - (25%)
• Similarity: 105/251 - (41%)
• Gaps: 55/251 - (21%)

  Fly     9 KYLLYLLNLVFVAGGILLIVVG------SIMLSTMGNFTAFDGGVNTQTIPICI-IVIGSVTFVV 66
            ||.|:..|:||...|.|.:.:|      ..:||.:...|.. ||::    |:.: :|||.:..|:
  Rat    18 KYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISGLTDL-GGLD----PVWLFVVIGGIMSVL 77

  Fly    67 AFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVD---KAWDENNAA 128
            .|.||.|.:|||......:::.:.::|.|:||..|..|...|.....:...::   ||:.::...
  Rat    78 GFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDIDL 142

  Fly   129 QGYPMDALQLAFSCCGNTGYQQYET-----------------VPSSC-------------CGYKD 163
            |.. :|..|..:||||..|...:..                 ||.||             |||..
  Rat   143 QNL-IDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDI 206

  Fly   164 RTKV---CEAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLA 216
            |.|:   .:..||::  ||..:|..:...|..::....:.|||.:    |...|||
  Rat   207 RLKLELEQQGSIYTK--GCVGQFEKWLQDNLIVVAGVLVAIALLQ----ICGICLA 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eb	NP_724525.1	Tetraspanin	8..216	CDD:459767	63/249 (25%)
Tspan17	XP_006253692.1	Tetraspanin	18..260	CDD:459767	65/251 (26%)
		TM4SF9_like_LEL	115..235	CDD:239412	26/122 (21%)