Protein Alignment Tsp42Eb and Tspan1

DIOPT Version :10

• Sequence 1: NP_724525.1
• Gene: Tsp42Eb / 59177
• FlyBaseID: FBgn0042086
• Length: 222
• Species: Drosophila melanogaster
• Sequence 2: NP_001004236.1
• Gene: Tspan1 / 298436
• RGDID: 1303308
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 253
• Identity: 54/253 - (21%)
• Similarity: 99/253 - (39%)
• Gaps: 55/253 - (21%)

  Fly     1 MNC------LSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVI 59
            |.|      :..:|..|::|.....:|.||.:.|.|:..|...|:.::  ..:....:...:|..
  Rat     1 MQCFKFIKVMMILFNLLIFLCGAALLAVGIWVSVDGTSFLKAFGSLSS--SAMQFVNVGYFLIAA 63

  Fly    60 GSVTFVVAFFGCCGTIRENACCTTIYAICMLILF-----GLQLALSIWIFAANDKFLSSM-GKAV 118
            |:|.|::.|.||.|...||.|...::...:||:|     |..:||.....|  ::||:.: ..|:
  Rat    64 GAVLFILGFLGCYGAHSENKCVLMMFFSILLIIFIAEIAGAVVALVYTTMA--EQFLTFLVVPAI 126

  Fly   119 DKAWDENNAAQGYPMDALQL------AFSCCGNTGYQQY---------ETVPSSCCG-------- 160
            :|.:       ||..:..|:      ...|||...|..:         :..|..||.
  Rat   127 EKDY-------GYQTEFTQVWNSTMEGLHCCGFNNYTDFNSSRFVKENKVFPPFCCANNTDSHTV 184

  Fly   161 ---YKDRTKVCEAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCL 215
               .:|:.|....:      ||.::.:....:|...:...::.:|..||...::|..|
  Rat   185 EPCTEDKAKSMNVQ------GCFKQILQKIRTNAVTVGGVAVGVAALELAAMVVSMYL 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eb	NP_724525.1	Tetraspanin	8..216	CDD:459767	52/240 (22%)
Tspan1	NP_001004236.1	Tetraspanin	7..>151	CDD:459767	36/154 (23%)
		uroplakin_I_like_LEL	106..211	CDD:239409	21/119 (18%)