DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Cd37

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_017444339.1 Gene:Cd37 / 29185 RGDID:62035 Length:396 Species:Rattus norvegicus


Alignment Length:266 Identity:64/266 - (24%)
Similarity:103/266 - (38%) Gaps:59/266 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDG--GVNTQTIPICIIVIGSVTF 64
            :||| :.||.|::.||.|...|.|:...|:.:|....:|.:|.|  .|..||....:.|.|.:|.
  Rat    29 SCLS-LIKYFLFVFNLFFFVLGGLIFCFGTWILIDKTSFVSFVGLSFVPLQTWSKVLSVSGVLTM 92

  Fly    65 VVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAW------- 122
            .:|..||.|.::|..|...:|...:|:||..|:.|.|.|.....:....:.:.|.:..       
  Rat    93 ALALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRVRLERRVQELVLRTIQSYRTNP 157

  Fly   123 DENNAAQGYPMDALQLAFSCCGNTGYQQYET-------------VPSSC---------CGY---- 161
            ||..|.:.:  |..|....|||....:.:..             ||.||         .|:    
  Rat   158 DETAAEESW--DYAQFQLRCCGWQSPRDWNKAQMLKANGSEELFVPCSCYNSTATNDSSGFDKLF 220

  Fly   162 -------------KDRTKVC----EAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIF 209
                         :....:|    :|.||  |.||.:. :..|..| ::|....:.:.:..|.:.
  Rat   221 LSQLSRLGPRAKLRQTADICALPAKAHIY--REGCARS-LQKWLHN-NIISIVGICLGVGLLEVS 281

  Fly   210 IMSCCL 215
            .|:.||
  Rat   282 GMALCL 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 61/260 (23%)
Cd37XP_017444339.1 Tetraspanin 49..>177 CDD:459767 34/129 (26%)
CD37_CD82_like_LEL 131..266 CDD:239413 24/140 (17%)

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