DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tsp-2

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_498803.1 Gene:tsp-2 / 259752 WormBaseID:WBGene00006628 Length:234 Species:Caenorhabditis elegans


Alignment Length:163 Identity:31/163 - (19%)
Similarity:65/163 - (39%) Gaps:33/163 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 ICIIVIGSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAV 118
            :|||. |.::.:    |..|.|.:.........:.::|.|.::|..||.:::......|.:.:..
 Worm    77 LCIIA-GPLSII----GLIGAISQKKPVLATCLVLIVIFFIMELGGSIALWSKRGSLRSLLYRFA 136

  Fly   119 DKAWDENNAAQGYPMDALQLAFSCCG-NTGYQQYETVPSSCCGYKDRTKVCEAEIYSQRPGCRQE 182
            :..:..|:.   :.:..:|..::||| ..|..:....||           |:..:::.       
 Worm   137 NDIYLTNSV---FDISIIQNTYNCCGVQDGQWKCPNAPS-----------CDIALFNS------- 180

  Fly   183 FVDFWASNTDLIRWSSLIIALFELGIFIMSCCL 215
             ||    ||.:|. ..::|.:..|.|.|:...:
 Worm   181 -VD----NTMMIS-GIILIPVLLLQIVIIGAAV 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 31/163 (19%)
tsp-2NP_498803.1 Tetraspanin <84..203 CDD:459767 26/149 (17%)

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