DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Cd81

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_063138178.1 Gene:Cd81 / 25621 RGDID:2315 Length:248 Species:Rattus norvegicus


Alignment Length:222 Identity:56/222 - (25%)
Similarity:94/222 - (42%) Gaps:45/222 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYLLYLLNLVF-VAGGILLIV---------VGSIMLSTMGNFTA---FDGGVNTQTIPICIIVIG 60
            ||||::.|.|| :|||::|.|         ..|::...:|:..|   |..|:      ..:|.:|
  Rat    11 KYLLFVFNFVFWLAGGVILGVALWLRHDPQTTSLLYLELGDKPAPSTFYVGI------YILIAVG 69

  Fly    61 SVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAW--- 122
            :|...|.|.||.|.|:|:.|....:..|::|||..::|..||.|...|:....:.:..|:|.   
  Rat    70 AVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQALQQA 134

  Fly   123 ----DENNAAQGYPMDALQLAFSCCGNTGYQQYETV-------PSSCCGYKDRTKVCEAEIYSQR 176
                |.|||..  .:.......:|||:.......|.       |||...:....|          
  Rat   135 VMDDDANNAKA--VVKTFHETLNCCGSNTLTTLTTTVLRNSLCPSSSNSFTQLLK---------- 187

  Fly   177 PGCRQEFVDFWASNTDLIRWSSLIIAL 203
            ..|.|:..:.::....||..:::::|:
  Rat   188 EDCHQKIDELFSGKLYLIGIAAIVVAV 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 56/222 (25%)
Cd81XP_063138178.1 None

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