DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eb and Tspan33

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_666285.1 Gene:Tspan33 / 232670 MGIID:1919012 Length:283 Species:Mus musculus


Alignment Length:271 Identity:69/271 - (25%)
Similarity:116/271 - (42%) Gaps:77/271 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSAMFKYLLYLLNLVFVAGGILLIVVG---------SIMLSTMGNFTAFDGGVNTQTIPICIIVI 59
            :|.:.||||:..|::|....::::.||         ...|:.:    |.|..       |.:||:
Mouse    18 VSPLVKYLLFFFNMLFWVISMVMVAVGVYARLMKHAEAALACL----AVDPA-------ILLIVV 71

  Fly    60 GSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDE 124
            |.:.|::.|.||.|::|||.|....:::|:.|:|.||||..|..|..:||....:.:.:      
Mouse    72 GVLMFLLTFCGCIGSLRENICLLQTFSLCLTIVFLLQLAAGILGFVFSDKARGKVSEII------ 130

  Fly   125 NNAAQGYP--------MDALQLAFSCCGNTGYQQYE-----------------TVPSSCC----- 159
            |||...|.        :|..|..|||||...|:.:.                 :||.|||     
Mouse   131 NNAIVHYRDDLDLQNLIDFGQKKFSCCGGISYRDWSQNMYFNCSEDNPSRERCSVPYSCCLPTPN 195

  Fly   160 ---------------GYKDRTKVCEAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIF 209
                           .|.:.:||    ||:.  ||..:.|::..||..|:...:|.:|:.:|...
Mouse   196 QAVINTMCGQGMQALDYLEASKV----IYTN--GCIDKLVNWIHSNLFLLGGVALGLAIPQLVGI 254

  Fly   210 IMSCCLASAMR 220
            ::|..|.:.::
Mouse   255 LLSQVLVNQIK 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 67/261 (26%)
Tspan33NP_666285.1 Tetraspanin 22..262 CDD:459767 68/262 (26%)
penumbra_like_LEL 116..236 CDD:239411 29/131 (22%)

Return to query results.
Submit another query.