DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Tspan7

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_062608.2 Gene:Tspan7 / 21912 MGIID:1298407 Length:249 Species:Mus musculus


Alignment Length:236 Identity:60/236 - (25%)
Similarity:101/236 - (42%) Gaps:29/236 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFV 65
            :.||    |.||.:.:.||...|::|:.||.....|:|.:.:.. ..|:...|..:|..|:...|
Mouse    12 ITCL----KTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLI-AENSTNAPYVLIGTGTTIVV 71

  Fly    66 VAFFGCCGTIRENACCTTIYAICMLILFGLQLALSI--WIF--AANDKFLSSMGKAVD--KAWDE 124
            ...|||..|.|.:.....:||:.:.::|..:|...|  ::|  ...|.||.:...|:.  ...||
Mouse    72 FGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTFLRTYTDAMQNYNGNDE 136

  Fly   125 NNAAQGYPMDALQLAFSCCGNTGYQQYET--------VPSSCCGYK------DRTKVCEAEIYSQ 175
            .:.|    :|.:|.:.||||...|..:.:        :|.|||..:      |...:..|.....
Mouse   137 RSRA----VDHVQRSLSCCGVQNYTNWSSSPYFLDHGIPPSCCMNETDCNPLDLHNLTVAATKVN 197

  Fly   176 RPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLA 216
            :.||......|..:|..:|...:..||..:|...:::|||:
Mouse   198 QKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLS 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 57/227 (25%)
Tspan7NP_062608.2 Tetraspanin 15..239 CDD:459767 59/233 (25%)
TM4SF2_6_like_LEL 110..213 CDD:239414 24/106 (23%)

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