DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eb and Tspan10

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_663338.2 Gene:Tspan10 / 208634 MGIID:2384781 Length:332 Species:Mus musculus


Alignment Length:258 Identity:61/258 - (23%)
Similarity:105/258 - (40%) Gaps:52/258 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGS-VTFV 65
            ||:    |||::|.|.:|....:|.:..|...| |:........|....|.|:.::|:|. |..|
Mouse    73 NCV----KYLIFLSNFLFSLPSLLALAAGLWGL-TVKRSQGIGWGGPVPTDPMLMLVLGGLVVSV 132

  Fly    66 VAFFGCCGTIRENACCTTIYAICMLILFGLQ-------LALSIWIFAANDKFLSSMGKAVDKAWD 123
            |:..||.|...||:|....|  |..:||.|.       |.:::| ....|....::..|:...||
Mouse   133 VSLSGCLGAFCENSCLLHWY--CGAVLFCLALEALAGVLMVTLW-KPLQDSLKYTLHAAIIHYWD 194

  Fly   124 ENNAAQGYPMDALQLAFSCCGNTGYQQYE---------------TVPSSCC------GYKDRTK- 166
            :.:.  .:.:|.:||...|||...||.::               ::|:|||      |....|: 
Mouse   195 DPDL--HFLLDQVQLGLQCCGAVSYQDWQQNLYFNCSSPGVQACSLPASCCINPQEDGAVVNTQC 257

  Fly   167 ----------VCEAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLASAM 219
                      |....::.|  ||.....::...||..|...::.:.:.:....:::.||..|:
Mouse   258 GFGALGLDQNVAGQVVFLQ--GCWPALQEWLRGNTGAIGDCAVAVVMIQGTELLLAACLLRAL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 57/247 (23%)
Tspan10NP_663338.2 Tetraspanin 75..225 CDD:459767 43/159 (27%)
oculospanin_like_LEL 171..290 CDD:239420 23/123 (19%)

Return to query results.
Submit another query.