DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tsp-5

DIOPT Version :9

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_502621.3 Gene:tsp-5 / 192061 WormBaseID:WBGene00006631 Length:241 Species:Caenorhabditis elegans


Alignment Length:249 Identity:56/249 - (22%)
Similarity:102/249 - (40%) Gaps:49/249 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NCLSAMFKYLLYLLNLVFVAGGILL-------------IVVGS---IMLSTMGNFTAFDGGVNTQ 50
            |....:..:|.::|||..:..|:::             :.|..   :.|.::.|...|   ...:
 Worm     4 NVCGKLANFLFFILNLGLIVVGVIITWYSIWMVLHQFEVTVARTSLVNLLSVDNIECF---YVYR 65

  Fly    51 TIPICIIVIGSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMG 115
            ||.   |:||....|:.|.||......:....:::.:.:.|:|.::: ::|.:|.||:..|....
 Worm    66 TIS---IMIGGCMVVLGFCGCFAVGFGSKTALSVHLVLVFIVFVVKI-VAIVMFLANNDHLRREF 126

  Fly   116 KAVDKAWDE------NNAAQGYPMDALQLAFSCCGNTGYQQY---ETVPSSC-CGYKDRTKVCEA 170
            ..|.:  ||      ||:.....:|.:..:..|||..|.:.:   ...|:|| ||.|:.....| 
 Worm   127 VGVYR--DELVANYHNNSRTKNTLDWVHTSLKCCGANGCEDFLPAGNFPTSCECGTKNAVVRME- 188

  Fly   171 EIYSQRPGCRQEFVDFWA---SNTDLIRWSSLIIALFELGIFIMSCCLASAMRK 221
                   ||.   :..||   ..|..:.:..||..|.|||:.|.:..:...:|:
 Worm   189 -------GCA---LITWAVFEDGTLQVAFLGLICMLIELGLMIFAAIVIDRIRR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspannin 8..219 CDD:278750 54/239 (23%)
tetraspanin_LEL 104..191 CDD:239401 25/99 (25%)
tsp-5NP_502621.3 Tetraspannin 11..223 CDD:278750 54/231 (23%)
tetraspanin_LEL 116..191 CDD:239401 21/84 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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