DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tsp-13

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_741692.1 Gene:tsp-13 / 189737 WormBaseID:WBGene00006639 Length:321 Species:Caenorhabditis elegans


Alignment Length:176 Identity:50/176 - (28%)
Similarity:74/176 - (42%) Gaps:33/176 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTI-------------PICIIVIG 60
            ||.::..|:||:..|.||:.:| :.|.|...|..|......|.:             ...|||:|
 Worm    58 KYGIFTANIVFLIVGGLLLAMG-VWLRTDSRFRNFISERYRQAVQEAFWEAPTLFAFSYIIIVLG 121

  Fly    61 SVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDEN 125
            :|..|||..||||....:.....||::.:.:|....|:..|::....|      |..|:.:...|
 Worm   122 AVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKD------GLDVELSDALN 180

  Fly   126 NAAQGY---------PMDALQLAFSCCGNTGYQQY----ETVPSSC 158
            ...|.|         .:|.||.||.||||.|...:    :.:|.||
 Worm   181 YMVQHYYQGPGVVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSC 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 50/176 (28%)
tsp-13NP_741692.1 Tetraspanin 58..271 CDD:459767 50/176 (28%)

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