DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tsp-8

DIOPT Version :9

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:294 Identity:59/294 - (20%)
Similarity:107/294 - (36%) Gaps:89/294 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNT-----QTIPIC------ 55
            :|::|: :.:.:|.|..|...|:::..:|..:|        ||...:.     .|.|..      
 Worm     3 SCVNAL-RIVTFLFNFAFWLSGVVVFGLGIWLL--------FDPAASDFFALHSTHPGAFRYVGW 58

  Fly    56 -IIVIGSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFL----SSMG 115
             ::..|::..:|.:|||.|..:.|.|....:...:::.|.|:||.::.:|...:...    |||.
 Worm    59 FLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMY 123

  Fly   116 KAVDKAWDENNAAQGYPMDALQLAFSCCG------------------------------------ 144
            ..:...:....|.:. ..|.:|..|.|||                                    
 Worm   124 DTIRNRYSSETAFKD-AFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEVNEEDAGRIEHGIGA 187

  Fly   145 -----NTGYQQYETVPSSCC---GYKDRTKVCEAEIYSQRP-----------GCRQEFVDFWASN 190
                 .|||.:   ||||||   |.......| ...:||.|           ||.....:..:|:
 Worm   188 FGGNKGTGYGR---VPSSCCNEHGKLSYPNNC-GRSFSQAPLNTYAQFINTRGCADAVYESVSSS 248

  Fly   191 TDLIRWSSLIIALFE-LGIFI---MSCCLASAMR 220
            ..||....:::.:.: |||.:   :.||..::.:
 Worm   249 LSLIVGVCVVLCIVQLLGIVLSMTLCCCKGNSKK 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspannin 8..219 CDD:278750 57/285 (20%)
tetraspanin_LEL 104..191 CDD:239401 28/145 (19%)
tsp-8NP_510445.1 Tetraspannin 8..276 CDD:278750 55/281 (20%)
Heme_Cu_Oxidase_I 13..>108 CDD:294196 22/102 (22%)
tetraspanin_LEL 108..243 CDD:239401 27/139 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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