DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tsp-14

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001367834.1 Gene:tsp-14 / 180761 WormBaseID:WBGene00006640 Length:451 Species:Caenorhabditis elegans


Alignment Length:275 Identity:70/275 - (25%)
Similarity:109/275 - (39%) Gaps:67/275 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSAMFKYLLYLLN-LVFVAG-GILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVV 66
            :||..|:|::||| :||:.| |||.:.| .:.:.........|..:|.   .|.|.:.|....||
 Worm    50 ISACLKWLVFLLNSIVFLVGVGILALGV-YLFIKDFREVKLVDIILNP---AILISIFGFSICVV 110

  Fly    67 AFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENNAAQGY 131
            :|||..|.:|:|......:|.|:.:.:.|.:|:::..|..   |.:...:.:...|....|.:.|
 Worm   111 SFFGFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTL---FYTDTTEGLSANWLLLYAVKNY 172

  Fly   132 P--------MDALQLAFSCCG-----------NTGYQ--------QYET--VPSSCC-------- 159
            .        |||||....|||           |..||        |.|.  ||.|||        
 Worm   173 HTNRNLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEA 237

  Fly   160 -GYKD------RTKVCEAEIYSQRP----------GCRQEFVDFWASNTDLIRWSSLIIALFELG 207
             |..:      |:..|.....::||          ||.|.....:.|:...:   ...:||..:.
 Worm   238 AGSSNPLLPAMRSLECWQNALTKRPGDLEHDIYTRGCLQPLRTLFESHAVHV---GAFVALLIVP 299

  Fly   208 IFIMSCCLASAMRKR 222
            :.| |.||.:.:.|:
 Worm   300 VCI-SVCLTNILAKQ 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 66/263 (25%)
tsp-14NP_001367834.1 Tetraspanin 54..>193 CDD:459767 40/145 (28%)
tetraspanin_LEL 145..286 CDD:351888 32/143 (22%)

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