DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tsp-9

DIOPT Version :9

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_508232.1 Gene:tsp-9 / 180472 WormBaseID:WBGene00006635 Length:233 Species:Caenorhabditis elegans


Alignment Length:245 Identity:52/245 - (21%)
Similarity:101/245 - (41%) Gaps:44/245 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIML--------STMGNFTAFDGGVNTQTI----- 52
            |.|.::..|.|.:::|......|.|  :.|..:.        |.:.:|.....|::.:.:     
 Worm     1 MVCGNSCIKLLFFVINFFICIFGAL--ICGFSLWANLDKNFGSHLSDFVRQIEGIDQKLVNEIAE 63

  Fly    53 ---PICIIV-IGSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSS 113
               .:.|:| :|::.|:|.||||||...|:.....::...::||..::|..:::.....::|:||
 Worm    64 YQASLWILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSS 128

  Fly   114 MGKAVDKAWDENNAAQGYPM----DALQLAFSCCGNTGYQQYETVPSSCCGYKDRTKVCEAEIYS 174
            :.:.:.|      ::..|.:    ..:|..|.|||.|...|...:....||         .|..|
 Worm   129 IQQVLKK------SSATYELRKNIKPIQNVFQCCGATAQTQNRYIQDGLCG---------PEPLS 178

  Fly   175 QRPGC---RQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLASAMRK 221
            ....|   ....|..|..:..::.:..|.|.||.:   :.||.|..:.::
 Worm   179 APVNCFDRISHMVQSWGESIVVVAFLLLAIELFAI---LFSCILCRSSQE 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspannin 8..219 CDD:278750 50/234 (21%)
tetraspanin_LEL 104..191 CDD:239401 19/93 (20%)
tsp-9NP_508232.1 Tetraspannin 7..222 CDD:278750 50/234 (21%)
tetraspanin_LEL 116..>167 CDD:243179 12/56 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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