DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Cd9

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_031683.1 Gene:Cd9 / 12527 MGIID:88348 Length:226 Species:Mus musculus


Alignment Length:229 Identity:51/229 - (22%)
Similarity:99/229 - (43%) Gaps:26/229 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SAMFKYLLYLLNLVFVAGGILLIVVG---------SIMLSTMGNFTAFDGGVNTQTIPICIIVIG 60
            |...||||:..|.:|...||.::.:|         ..:.....|.::|..||      ..:|..|
Mouse     7 SKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQENNHSSFYTGV------YILIGAG 65

  Fly    61 SVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDE- 124
            ::..:|.|.||||.::|:.|...::...:|::|.:::|.::|.:...|:.:..:.:.....:.: 
Mouse    66 ALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKDEVIKELQEFYKDTYQKL 130

  Fly   125 --NNAAQGYPMDALQLAFSCCGNTGYQQYETVPSSCCGYKDRTKVCEAEIYSQRPGCRQEFVDFW 187
              .:..|...:.|:.:|..|||..|  ..|...|..|..|..     .|.:..:| |.:...:.:
Mouse   131 RSKDEPQRETLKAIHMALDCCGIAG--PLEQFISDTCPKKQL-----LESFQVKP-CPEAISEVF 187

  Fly   188 ASNTDLIRWSSLIIALFELGIFIMSCCLASAMRK 221
            .:...:|....:.||:..:...|.|..|..|:|:
Mouse   188 NNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRR 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 47/219 (21%)
Cd9NP_031683.1 Tetraspanin 10..217 CDD:459767 48/220 (22%)
CD9_LEL 109..191 CDD:239405 15/89 (17%)

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