DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Cd81

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_598416.1 Gene:Cd81 / 12520 MGIID:1096398 Length:236 Species:Mus musculus


Alignment Length:231 Identity:62/231 - (26%)
Similarity:108/231 - (46%) Gaps:38/231 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYLLYLLNLVF-VAGGILLIV---------VGSIMLSTMGNFTAFDGGVNTQTIPICIIV-IGSV 62
            ||||::.|.|| :|||::|.|         ..|::...:||..|    .||..:.|.|:: :|:|
Mouse    11 KYLLFVFNFVFWLAGGVILGVALWLRHDPQTTSLLYLELGNKPA----PNTFYVGIYILIAVGAV 71

  Fly    63 TFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAW----- 122
            ...|.|.||.|.|:|:.|....:..|::|||..::|..||.|...|:....:.:..|:|.     
Mouse    72 MMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVM 136

  Fly   123 --DENNAAQGYPMDALQLAFSCCGNTGYQQYET--VPSSCC--GYKDRTKVCEAEIYSQRPGCRQ 181
              |.|||..  .:.......:|||:.......|  :.:|.|  |....|.:.:.:       |.|
Mouse   137 DDDANNAKA--VVKTFHETLNCCGSNALTTLTTTILRNSLCPSGGNILTPLLQQD-------CHQ 192

  Fly   182 EFVDFWASNTDLIRWSSLIIA---LFELGIFIMSCC 214
            :..:.::....||..:::::|   :||:.:.::.||
Mouse   193 KIDELFSGKLYLIGIAAIVVAVIMIFEMILSMVLCC 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 62/231 (27%)
Cd81NP_598416.1 Tetraspanin 10..228 CDD:459767 60/229 (26%)

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