DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and Cd53

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_031677.1 Gene:Cd53 / 12508 MGIID:88341 Length:219 Species:Mus musculus


Alignment Length:240 Identity:52/240 - (21%)
Similarity:94/240 - (39%) Gaps:76/240 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MFKYLLYLLNLVF-VAG------GILLIVVG-------SIMLSTMGNFTAFDGGVNTQTIPICII 57
            :.||:|::.||:| |.|      ||..:|..       ::...|:||.               ::
Mouse     8 LLKYVLFIFNLLFWVCGCCILGFGIYFLVQNTYGVLFRNLPFLTLGNI---------------LV 57

  Fly    58 VIGSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVD--- 119
            ::||:..||||.||.|:|:||.|....:.:.:||:...::.::|.:|....|..:.:.:.::   
Mouse    58 IVGSIIMVVAFLGCMGSIKENKCLLMSFFVLLLIILLAEVTIAILLFVYEQKLNTLVAEGLNDSI 122

  Fly   120 ----------KAWDENNAAQGYPMDALQLAFSCCGNTGYQQYETVPSSCCGYKDRTKVCEAEIYS 174
                      |||           |.:|....|||..|...:.:.|.|.|       ...|::  
Mouse   123 QHYHSDNSTMKAW-----------DFIQTQLQCCGVNGSSDWTSGPPSSC-------PSGADV-- 167

  Fly   175 QRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIFIMSCCLASAM 219
              .||..:...::.||            ...:||..:..|:...:
Mouse   168 --QGCYNKAKSWFHSN------------FLYIGIITICVCVIQVL 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 52/234 (22%)
Cd53NP_031677.1 Tetraspanin 9..208 CDD:459767 52/239 (22%)
CD53_like_LEL 104..186 CDD:239417 19/115 (17%)

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