DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and UPK1A

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_054175633.1 Gene:UPK1A / 11045 HGNCID:12577 Length:313 Species:Homo sapiens


Alignment Length:241 Identity:45/241 - (18%)
Similarity:70/241 - (29%) Gaps:89/241 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VFVAGGILLIVVG-SIMLSTM----------------GNFTAFDGGVNTQTIPICIIVIGSVTFV 65
            :.|.|.|::::.| |:...|:                |....|.|.       ...|..|...|:
Human    20 LLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGA-------WIAIFCGFSFFM 77

  Fly    66 VAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSS----------------- 113
            ||.||....:.........|.:.|||::..:.|..|..:...|..:|:                 
Human    78 VASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFYSADTD 142

  Fly   114 MGKAVDKAWDENNAAQGYPMDALQLAFSCCGNTGYQQY------------ETV---PSSCCGYKD 163
            .|:.:.:.||.           :.:...|||.:|...:            |.|   |..||....
Human   143 QGQELTRLWDR-----------VMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTG 196

  Fly   164 RTKVCEAEIYSQRPGCRQEFVDFWASNTDLIRWSSLIIALFELGIF 209
            ..      |.....|||...:|:                ||..|.|
Human   197 NF------IPLNEEGCRLGHMDY----------------LFTKGCF 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 45/241 (19%)
UPK1AXP_054175633.1 Tetraspanin 25..>163 CDD:459767 27/155 (17%)
uroplakin_I_like_LEL 113..231 CDD:239409 24/141 (17%)

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