DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and TSPAN3

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_005715.1 Gene:TSPAN3 / 10099 HGNCID:17752 Length:253 Species:Homo sapiens


Alignment Length:235 Identity:56/235 - (23%)
Similarity:104/235 - (44%) Gaps:26/235 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVVAFFGCCG 73
            |.:|..|||:|.....:|..||:.:..|..::..|...|.|....:.||.:|::.|::...|||.
Human    10 KTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVVIIAVGALLFIIGLIGCCA 74

  Fly    74 TIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENNA----AQGYPMD 134
            ||||:.|....:.|.:|::|..::.:.:..:....|..:.:.:::.|.:...|.    |....:|
Human    75 TIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNPDAASRAID 139

  Fly   135 ALQLAFSCCGNTGYQQYE-----------TVPSSCCGYKDRTKVCE------AEIYSQRPGCRQE 182
            .:|....|||...|..:|           :||.|||  ::....|.      :::|::  ||...
Human   140 YVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCC--RETASNCNGSLAHPSDLYAE--GCEAL 200

  Fly   183 FVDFWASNTDLIRWSSLIIALFELGIFIMSCCLASAMRKR 222
            .|.........:.|::|..|..:| :.::..|:....|.|
Human   201 VVKKLQEIMMHVIWAALAFAAIQL-LGMLCACIVLCRRSR 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 54/227 (24%)
TSPAN3NP_005715.1 Tetraspanin 9..235 CDD:459767 54/229 (24%)
TM4SF8_like_LEL 104..210 CDD:239416 21/109 (19%)

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