DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and cd53

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_002942834.1 Gene:cd53 / 100496085 XenbaseID:XB-GENE-868554 Length:228 Species:Xenopus tropicalis


Alignment Length:204 Identity:44/204 - (21%)
Similarity:103/204 - (50%) Gaps:13/204 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KYLLYLLNLVFVAGGILLIVVG--SIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVVAFFGC 71
            |||::..|.:|...|..:|.:|  .::.:..|:....:..:   |:...:|.||.:..|..|.||
 Frog    10 KYLMFAFNFLFWVTGCSIIAIGIYFVVNNIYGDLLTNNPSL---TVGNALIAIGIIIMVFGFLGC 71

  Fly    72 CGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDEN---NAAQGYPM 133
            .|.|:||.|....:.|.:|::...::.::|.:|....:..:.:...:..::::|   |:::.:  
 Frog    72 MGAIKENKCLLLTFFILLLLILLAEVIMAILLFVYEKQLDNYVRDRLTSSFEQNLKQNSSETW-- 134

  Fly   134 DALQLAFSCCGNTGYQQY-ETVPSSCCGYKDRTKVCEAEIYSQRPGCRQEFVDFWASNTDLIRWS 197
            :.:|....|||..|.:.: :.:|:|||.....:|..:|:::  :.||.:...:::..|...:...
 Frog   135 NIIQRNLQCCGINGTKDWKDNIPNSCCASNANSKCSQADLF--KMGCSEALKNWFEKNFLYVGVG 197

  Fly   198 SLIIALFEL 206
            ::.|::.|:
 Frog   198 TICISVIEV 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 44/204 (22%)
cd53XP_002942834.1 Tetraspanin 9..217 CDD:459767 44/204 (22%)
tetraspanin_LEL 104..195 CDD:351888 17/94 (18%)

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