DRSC/TRiP Functional Genomics Resources

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Protein Alignment Apt1 and ath-1

DIOPT Version :10

Sequence 1:NP_001261719.1 Gene:Apt1 / 59176 FlyBaseID:FBgn0042138 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001293296.1 Gene:ath-1 / 172587 WormBaseID:WBGene00010564 Length:304 Species:Caenorhabditis elegans


Alignment Length:210 Identity:101/210 - (48%)
Similarity:130/210 - (61%) Gaps:1/210 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PVIVEATVKQTATLIFMHGLGDTGHGWSSAL-AAIRPPFMKVICPTAPTQPVSLNAGFRMPSWFD 67
            |.||....:...||||:|||||.||||:.|. ...:...:|.|||.:..:||:||.|.|||:|||
 Worm    90 PSIVSPRGEHKGTLIFLHGLGDQGHGWADAFKTEAKHDNIKFICPHSSERPVTLNMGMRMPAWFD 154

  Fly    68 LKTLDIGGPEDEPGIQSARDSVHGMIQKEISAGIPANRIVLGGFSQGGALALYSALTYDQPLAGV 132
            |..||....|||.||..|...||.:|..|::|||||:||.:||||.|||||:|:.|||.|.|.|:
 Worm   155 LFGLDPNAQEDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLGGI 219

  Fly   133 VALSCWLPLHKQFPGAKVNSDDVPIFQAHGDYDPVVPYKFGQLSASLLKSFMKNVTFKTYSGLSH 197
            |.||.:.....:|||:...::..|||..||..|.:||.:|||:|...:|.|...|...||.|:.|
 Worm   220 VGLSSFFLQRTKFPGSFTANNATPIFLGHGTDDFLVPLQFGQMSEQYIKKFNPKVELHTYRGMQH 284

  Fly   198 SSSDDEMDDVKDIIS 212
            ||..:||.|||..:|
 Worm   285 SSCGEEMRDVKTFLS 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Apt1NP_001261719.1 Abhydrolase_2 1..214 CDD:396693 101/210 (48%)
ath-1NP_001293296.1 Abhydrolase_2 87..302 CDD:396693 101/210 (48%)

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