DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18814 and SDR3

DIOPT Version :10

Sequence 1:NP_652673.2 Gene:CG18814 / 59175 FlyBaseID:FBgn0042137 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_182235.1 Gene:SDR3 / 819326 AraportID:AT2G47130 Length:257 Species:Arabidopsis thaliana


Alignment Length:252 Identity:60/252 - (23%)
Similarity:98/252 - (38%) Gaps:55/252 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LEGKNVVYLGGFGGIGKKCVQELLKKQIKGLAI-FDLIVDDDLLAEWKKQHPDTEIFYQKMDITQ 66
            |:||..:..||..|||.:.|:.......|.:.: |...:..::.....|   |...|| :.|:|.
plant     6 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGK---DKASFY-RCDVTN 66

  Fly    67 KSDIDAAYKATAEKLGHFDVVVNGSGLLDD---------RRIELTIQINLVGVINSTLTALEYMD 122
            :.:::.|.|.|.||.|..||:.:.:|:::.         .:.:.|:.:|:.|.......|...| 
plant    67 EKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAAAFIKHAARAM- 130

  Fly   123 KSKGGRGGLIVNISSVAGLQPTPLMAIYSTSKTGVTTFTRAMASPIHYAHSGVGFI-TICPGYTN 186
            ..||.||. ||..:|||.....|....|:.||                 |:.:|.: :.|.|...
plant   131 VEKGTRGS-IVCTTSVASEIGGPGPHAYTASK-----------------HALLGLVKSACGGLGK 177

  Fly   187 TGI-------------LKDIDKKTTFPFYETRMRTVFSKVKGQTAEVC--ARNIVNA 228
            .||             :...|::|      .||...:|...|....|.  ||::..|
plant   178 YGIRVNGVAPYAVATAINSRDEET------VRMVEEYSAATGILKGVVLKARHVAEA 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18814NP_652673.2 Rossmann-fold NAD(P)(+)-binding proteins 6..248 CDD:473865 58/249 (23%)
SDR3NP_182235.1 Rossmann-fold NAD(P)(+)-binding proteins 5..252 CDD:473865 60/252 (24%)

Return to query results.
Submit another query.